Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901029.1_cds_XP_016451058.1_45451
CDS Infomation

[gene=LOC107775792] [db_xref=GeneID:107775792] [protein=pentatricopeptide repeat-containing protein At4g21065-like] [protein_id=XP_016451058.1] [location=69081..70862] [gbkey=CDS]
Sequence

ATGAATGACATGCAATCACATAACAACAGTGGAGAGAGCACAAAACCATACATTCTGAAA
AAATGCATTGCCCTTTTGCTTTCATGTGCCTCTTCAACTTACAAATTCAAGCAAGTACAT
GCATTTTCCATCAGACGTGGCATCCCTTTGTCAAGCCCAGAAATGGGCAAGTACTTGATT
TTCTCTCTAGTTTCCCTTTCAGGTCCGATGCGCTACGCCCAGAAAATCTTTAATCAAATT
CAATTTCCAAATATCTTTACTTGGAATACAATGATTAGAGGTTATGCTGAGAGTGAAAAC
CCGTATCCAGCTATTGAAATACACAATAAAATGTGTGTGAATTCTGTTGCACCTGACACA
CATACATACCCTTTTGTGTTAAAAGCTATTGCGAAGGTGATTGATGTTAGGGAAGGAGAA
AAGGTCCATTGCATTACAATTAGAAATGGGTTTGAATCGTTGGTGTTTGTTCAGAATTCT
TTGGTTCATTTCTATGGAGCTATTGGTCAAGCTGAGAATGCACATAAGGTGTTTGAGGAA
ATGTCTGACAAGAATCTTGTGGCATGGAATTCAGTGATTAATGGGTATGCTTTGAATAGT
CGACCTAATGAAACGTTGACCCTTTATAGGAGAATGGTTTTTGAAGGTGTTAAGCCTGAT
GGGTTTACTTTGGTTAGTTTGTTGACTGCTTCTGCTGAGCTTGGTGCTTTGGATTTGGGC
AGAAGGGCGCATGTGTTTATGTTGAAGGTGGGATTGGATAAGAATTTACATGCTGCAAAT
GCCCTTTTGGATCTTTATGCTAAATGTGGGAATGTAAAAGAGGCAGAGCAAGTTTTTGAT
GAGTTGGAGGAGGATAGTGTAGTTTCTTGGACCTCTTTGATTGTAGGTTTGGCTGTTAAC
GGGTTTGGTGAGAGAGCACTTGAGCTTTTCAAGGAAATGGAAAGAAAAGGATTTGTTCCT
ACTGAGATCACATTTGTTGGGGTGTTATATGCCTGTAGCCATTGTGGTTTGGTGGACAAA
GGCTTTGCTTACTTTGAAAGGATGCAAAAGGAGTTTGGAATTAAGCCAAAAATTGAACAT
TATGGCTGCATGGTTGATTTATTAGGAAGGGCTGGTTTAGTGGAAAAGGCGTACAAGTAT
ATTACAGACATGCCATTGCAACCCAATGCGGTGATTTGGCGAACATTACTCGGTGCCTGC
TCAATACATGGTCATTTAGCTCTAGCTGAGATGACCAGAAATCACCTTAAGCTGTTAGAA
CCTAAACATTCTGGAGATTATGTGCTCCTTTCGAACCTTTATGCAGCCGAAAGGCGATGG
TCAGATGTGCATAAACTGAGGAGAACTATGCTTAAAGAAGGGGTAAAGAAAGTCCCCGGG
CATAGTCTCGTTGAGTTGGGTAATCGTGTGCATGAATTTGTTATGGGAGATAGAACCCAT
CCTAAAACTGAGGCTATATATACTATGCTTGTGGAAATGACTAGATTGTTGAGATTGGAA
GGTTATGTCCCTCATACATCCAATGTGCTTGCTGACATAGAAGAAGAGGAGAAAGAGACT
GCTTTGGCGTACCATAGTGAAAAAATTGCAATTGCATTTATGTTGATCAGTACACCACCT
GGGACCTCTATTAGAATTGTGAAGAACTTAAGGGTCTGTGCTGATTGCCACCTTGCCATA
AAACTAATATCGAAAGTCTTTGATCGCGAGATAGTTGTTAGAGATCGTAGCCGGTTTCAC
CATTTCACCAATGGATCTTGCTCTTGTAAAGATTATTGGTAA

Peptide Sequence

PEP ID

XP_016451058.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Nicotiana tabacum]
Sequence

MNDMQSHNNSGESTKPYILKKCIALLLSCASSTYKFKQVHAFSIRRGIPLSSPEMGKYLI
FSLVSLSGPMRYAQKIFNQIQFPNIFTWNTMIRGYAESENPYPAIEIHNKMCVNSVAPDT
HTYPFVLKAIAKVIDVREGEKVHCITIRNGFESLVFVQNSLVHFYGAIGQAENAHKVFEE
MSDKNLVAWNSVINGYALNSRPNETLTLYRRMVFEGVKPDGFTLVSLLTASAELGALDLG
RRAHVFMLKVGLDKNLHAANALLDLYAKCGNVKEAEQVFDELEEDSVVSWTSLIVGLAVN
GFGERALELFKEMERKGFVPTEITFVGVLYACSHCGLVDKGFAYFERMQKEFGIKPKIEH
YGCMVDLLGRAGLVEKAYKYITDMPLQPNAVIWRTLLGACSIHGHLALAEMTRNHLKLLE
PKHSGDYVLLSNLYAAERRWSDVHKLRRTMLKEGVKKVPGHSLVELGNRVHEFVMGDRTH
PKTEAIYTMLVEMTRLLRLEGYVPHTSNVLADIEEEEKETALAYHSEKIAIAFMLISTPP
GTSIRIVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFTNGSCSCKDYW

Transcript Sequence

Gene sequence data has not been registered.